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  • Top cofit genes for PS417_11465 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: FIG032225: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25115 lipopolysaccharide biosynthesis protein no 0.22
    2 PS417_12925 serine dehydratase no 0.20
    3 PS417_05960 chemotaxis protein no 0.20
    4 PS417_01195 RNA-binding protein S4 no 0.20
    5 PS417_10865 GNAT family acetyltransferase no 0.20
    6 PS417_17345 hypothetical protein no 0.19
    7 PS417_03035 SAM-dependent methyltransferase no 0.19
    8 PS417_18280 transporter no 0.19
    9 PS417_09650 siderophore-interacting protein no 0.19
    10 PS417_24130 integrase no 0.19
    11 PS417_00650 LysR family transcriptional regulator no 0.18
    12 PS417_15350 membrane protein no 0.18
    13 PS417_14205 hypothetical protein no 0.18
    14 PS417_18630 tRNA-dihydrouridine synthase C 0.15 0.18
    15 PS417_03930 thymidine phosphorylase no 0.17
    16 PS417_23015 NGG1p interacting factor 3 protein, NIF3 no 0.17
    17 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.17
    18 PS417_20585 chemotaxis protein no 0.17
    19 PS417_08940 thioesterase no 0.17
    20 PS417_18180 dioxygenase no 0.17

    Or look for negative cofitness