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  • Top cofit genes for GFF2243 from Variovorax sp. SCN45

    Ornithine cyclodeaminase (EC 4.3.1.12)
    SEED: Ornithine cyclodeaminase (EC 4.3.1.12)
    KEGG: ornithine cyclodeaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3886 Putative transmembrane protein no 0.65
    2 GFF2155 Signal transduction histidine kinase CheA no 0.63
    3 GFF3743 Twitching motility protein PilT no 0.63
    4 GFF5415 Type IV fimbrial biogenesis protein PilV no 0.63
    5 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.62
    6 GFF2164 Transcriptional regulator, IclR family no 0.60
    7 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.60
    8 GFF5414 hypothetical protein no 0.60
    9 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.60
    10 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.59
    11 GFF2509 Type IV fimbrial assembly protein PilC no 0.59
    12 GFF5319 Type IV pilus biogenesis protein PilM no 0.59
    13 GFF5417 hypothetical protein no 0.59
    14 GFF5320 Type IV pilus biogenesis protein PilN no 0.59
    15 GFF6723 Cysteine desulfurase (EC 2.8.1.7) no 0.59
    16 GFF2847 histone-like nucleoid-structuring protein H-NS no 0.59
    17 GFF993 Type IV pilus biogenesis protein PilF no 0.59
    18 GFF5419 Type IV pilus biogenesis protein PilE no 0.58
    19 GFF5322 Type IV pilus biogenesis protein PilP no 0.58
    20 GFF4507 no description no 0.58

    Or look for negative cofitness