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  • Top cofit genes for PS417_11390 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26775 thiazole synthase 0.28 0.28
    2 PS417_27865 LysR family transcriptional regulator no 0.27
    3 PS417_24600 hydrogenase no 0.25
    4 PS417_27210 AsnC family transcriptional regulator no 0.24
    5 PS417_25625 hypothetical protein no 0.23
    6 PS417_12945 sulfonate ABC transporter ATP-binding protein no 0.22
    7 PS417_22450 ATP-dependent DNA helicase RuvA no 0.22
    8 PS417_22530 hypothetical protein no 0.21
    9 PS417_10645 magnesium ABC transporter ATPase no 0.20
    10 PS417_06680 nuclease PIN no 0.20
    11 PS417_22400 7-cyano-7-deazaguanine synthase no 0.20
    12 PS417_03000 translation initiation factor Sui1 no 0.20
    13 PS417_04795 alginate O-acetyltransferase no 0.20
    14 PS417_02355 thiamine biosynthesis protein ThiC no 0.19
    15 PS417_14905 C4-dicarboxylate ABC transporter no 0.19
    16 PS417_19350 GTP cyclohydrolase no 0.19
    17 PS417_28050 hypothetical protein no 0.19
    18 PS417_14045 alkyl hydroperoxide reductase 0.11 0.18
    19 PS417_00385 Fur family transcriptional regulator no 0.18
    20 PS417_24385 tRNA (uracil-5-)-methyltransferase no 0.18

    Or look for negative cofitness