Top cofit genes for GFF2229 from Variovorax sp. SCN45

Pca regulon regulatory protein PcaR
SEED: Pca regulon regulatory protein PcaR
KEGG: IclR family transcriptional regulator, pca regulon regulatory protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF1288 Sulfate transport system permease protein CysT 0.39 0.65
2 GFF2357 DNA repair protein RecN no 0.62
3 GFF627 Secretion protein HlyD no 0.60
4 GFF5984 L-lactate dehydrogenase 0.60 0.60
5 GFF1228 Fructose-bisphosphate aldolase class I (EC 4.1.2.13) no 0.60
6 GFF6770 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.49 0.60
7 GFF829 Aerobic cobaltochelatase CobN subunit (EC 6.6.1.2) 0.70 0.60
8 GFF5301 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.60
9 GFF5221 Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) no 0.59
10 GFF5335 Phospholipid ABC transporter permease protein MlaE 0.46 0.59
11 GFF3302 no description no 0.59
12 GFF2844 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.59
13 GFF4851 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.59
14 GFF1658 Transcriptional regulator, LysR family 0.29 0.59
15 GFF5331 Transposase and inactivated derivatives 0.51 0.59
16 GFF1088 Putative hemolysin no 0.59
17 GFF1289 Sulfate transport system permease protein CysW 0.35 0.58
18 GFF365 Acyl-CoA dehydrogenase 0.34 0.58
19 GFF4490 Site-specific tyrosine recombinase XerC 0.31 0.57
20 GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.57

Or look for negative cofitness