Top cofit genes for GFF2217 from Variovorax sp. SCN45

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank Hit Name Description Conserved? Cofitness  
1 GFF6653 Aminotransferase, class III no 0.52
2 GFF4333 Transcriptional regulator, LysR family no 0.50
3 GFF6854 RNA polymerase ECF-type sigma factor no 0.50
4 GFF585 no description no 0.48
5 GFF78 Cytochrome c family protein no 0.47
6 GFF6997 Flagellar basal-body rod protein FlgC no 0.44
7 GFF1888 BUG/TctC family periplasmic protein no 0.44
8 GFF2749 hypothetical protein no 0.43
9 GFF11 Two-component transcriptional response regulator, OmpR family no 0.43
10 GFF7262 no description no 0.43
11 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.42
12 GFF5547 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) no 0.42
13 GFF2005 Transcriptional regulator, AraC family no 0.42
14 GFF5470 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.41
15 GFF7321 Sensor histidine kinase GlrK no 0.41
16 GFF1120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.41
17 GFF4999 hypothetical protein no 0.41
18 GFF1220 Transcriptional regulator, MerR family no 0.41
19 GFF1976 Transcriptional regulator, AcrR family no 0.40
20 GFF600 Metal-dependent phosphohydrolase, HD subdomain no 0.40

Or look for negative cofitness