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  • Top cofit genes for GFF2216 from Variovorax sp. SCN45

    Uncharacterized protein Tbd_1903
    SEED: TPR repeat precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3056 Nitrogen assimilation regulatory protein Nac no 0.61
    2 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.58
    3 GFF5238 General secretion pathway protein L no 0.57
    4 GFF2207 Flp pilus assembly protein TadB no 0.54
    5 GFF5481 hypothetical protein no 0.53
    6 GFF944 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) no 0.52
    7 GFF2368 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) no 0.51
    8 GFF2438 Ferrichrome-iron receptor no 0.51
    9 GFF2978 Aromatic ring-cleaving dioxygenase no 0.50
    10 GFF6890 Threonine efflux protein no 0.50
    11 GFF4275 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.49
    12 GFF4007 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.48
    13 GFF5324 Shikimate kinase I (EC 2.7.1.71) no 0.48
    14 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.47
    15 GFF2433 Putative OMR family iron-siderophore receptor precursor no 0.47
    16 GFF74 Transcriptional regulator, LysR family no 0.46
    17 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) no 0.46
    18 GFF3536 Alcohol dehydrogenase (EC 1.1.1.1) no 0.46
    19 GFF2675 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) no 0.46
    20 GFF1551 hypothetical protein no 0.45

    Or look for negative cofitness