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Cofit
Protein
Homologs
Top cofit genes for GFF2216 from
Variovorax sp. SCN45
Uncharacterized protein Tbd_1903
SEED: TPR repeat precursor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3056
Nitrogen assimilation regulatory protein Nac
no
0.61
2
GFF2210
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
no
0.58
3
GFF5238
General secretion pathway protein L
no
0.57
4
GFF2207
Flp pilus assembly protein TadB
no
0.54
5
GFF5481
hypothetical protein
no
0.53
6
GFF944
Aromatic-amino-acid aminotransferase (EC 2.6.1.57)
no
0.52
7
GFF2368
ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate)
no
0.51
8
GFF2438
Ferrichrome-iron receptor
no
0.51
9
GFF2978
Aromatic ring-cleaving dioxygenase
no
0.50
10
GFF6890
Threonine efflux protein
no
0.50
11
GFF4275
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
no
0.49
12
GFF4007
Glutamate carboxypeptidase (EC 3.4.17.11)
no
0.48
13
GFF5324
Shikimate kinase I (EC 2.7.1.71)
no
0.48
14
GFF5325
3-dehydroquinate synthase (EC 4.2.3.4)
no
0.47
15
GFF2433
Putative OMR family iron-siderophore receptor precursor
no
0.47
16
GFF74
Transcriptional regulator, LysR family
no
0.46
17
GFF6239
Catalase KatE-intracellular protease (EC 1.11.1.6)
no
0.46
18
GFF3536
Alcohol dehydrogenase (EC 1.1.1.1)
no
0.46
19
GFF2675
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180)
no
0.46
20
GFF1551
hypothetical protein
no
0.45
Or look for
negative cofitness