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  • Top cofit genes for GFF2215 from Variovorax sp. SCN45

    L,D-transpeptidase
    SEED: ErfK/YbiS/YcfS/YnhG family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4661 no description no 0.59
    2 GFF5793 Low-affinity inorganic phosphate transporter no 0.54
    3 GFF51 hypothetical protein no 0.53
    4 GFF2520 UPF0053 inner membrane protein YtfL no 0.53
    5 GFF4150 Salicylate hydroxylase (EC 1.14.13.1) no 0.52
    6 GFF6755 hypothetical protein no 0.52
    7 GFF5584 Cyclic-di-GMP-binding biofilm dispersal mediator protein no 0.51
    8 GFF2726 hypothetical protein no 0.51
    9 GFF2643 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.51
    10 GFF5123 no description no 0.50
    11 GFF1334 Cocaine esterase (EC 3.1.1.-) no 0.50
    12 GFF1939 hypothetical protein no 0.48
    13 GFF6367 T6SS component TssF (ImpG/VasA) no 0.48
    14 GFF5938 T6SS component TssF (ImpG/VasA) no 0.48
    15 GFF3393 Benzoate ABC transporter, ATP-binding protein 2 no 0.48
    16 GFF7248 no description no 0.47
    17 GFF7141 FIG00537874: hypothetical protein no 0.47
    18 GFF810 Glutathione S-transferase (EC 2.5.1.18) no 0.47
    19 GFF6020 UPF0246 protein YaaA no 0.46
    20 GFF2683 Protein containing domains DUF404, DUF407 no 0.46

    Or look for negative cofitness