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  • Top cofit genes for GFF2214 from Variovorax sp. SCN45

    Flp pilus assembly protein, pilin Flp
    SEED: Flp pilus assembly protein, pilin Flp
    KEGG: pilus assembly protein Flp/PilA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1220 Transcriptional regulator, MerR family no 0.57
    2 GFF3212 Oxidoreductase no 0.55
    3 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.54
    4 GFF2927 Peptidylprolyl isomerase, FKBP-type (EC 5.2.1.8) no 0.53
    5 GFF2424 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) no 0.52
    6 GFF5127 no description no 0.50
    7 GFF2415 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) no 0.50
    8 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) no 0.48
    9 GFF5049 NAD-dependent protein deacetylase of SIR2 family no 0.48
    10 GFF2241 Transcriptional regulator, AcrR family no 0.48
    11 GFF4976 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.48
    12 GFF1478 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) no 0.47
    13 GFF1227 no description no 0.46
    14 GFF7383 Esterase/lipase no 0.45
    15 GFF2867 DNA recombination protein RmuC no 0.45
    16 GFF6241 Transglutaminase-like domain no 0.44
    17 GFF2020 BUG/TctC family periplasmic protein no 0.44
    18 GFF6576 Conjugative transfer protein TrbE no 0.44
    19 GFF830 ChlI component of cobalt chelatase involved in B12 biosynthesis no 0.44
    20 GFF7286 Dipeptide ABC transporter, ATP-binding protein DppD (TC 3.A.1.5.2) no 0.43

    Or look for negative cofitness