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  • Top cofit genes for PS417_11280 from Pseudomonas simiae WCS417

    HxcX atypical pseudopilin
    SEED: General secretion pathway protein K
    KEGG: general secretion pathway protein K

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_14405 ABC transporter permease no 0.25
    2 PS417_24550 ATP-dependent helicase 0.28 0.23
    3 PS417_04770 LysR family transcriptional regulator no 0.23
    4 PS417_02340 LysR family transcriptional regulator no 0.22
    5 PS417_08680 flagellar biosynthesis protein FlhB no 0.21
    6 PS417_05405 L-alanine and D-alanine permease (from data) no 0.21
    7 PS417_15540 NUDIX hydrolase no 0.21
    8 PS417_16255 RNA polymerase sigma factor no 0.20
    9 PS417_08865 large component of pyruvate transporter (actP-like) (from data) no 0.20
    10 PS417_17630 RNA polymerase sigma factor no 0.20
    11 PS417_01275 LysR family transcriptional regulator no 0.19
    12 PS417_02035 3-ketoacyl-ACP reductase no 0.19
    13 PS417_11510 AraC family transcriptional regulator no 0.19
    14 PS417_06420 ATP-dependent DNA ligase 0.30 0.18
    15 PS417_09510 transporter no 0.18
    16 PS417_10445 LysR family transcriptional regulator no 0.18
    17 PS417_15990 GntR family transcriptional regulator no 0.18
    18 PS417_10555 major facilitator transporter 0.87 0.17
    19 PS417_07195 hypothetical protein 0.11 0.17
    20 PS417_16295 hypothetical protein no 0.17

    Or look for negative cofitness