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  • Top cofit genes for GFF2212 from Variovorax sp. SCN45

    KEGG: prepilin peptidase CpaA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2050 hypothetical protein no 0.63
    2 GFF814 BUG/TctC family periplasmic protein no 0.61
    3 GFF4641 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.57
    4 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.56
    5 GFF3309 Beta-hexosaminidase (EC 3.2.1.52) no 0.55
    6 GFF6438 hypothetical protein no 0.55
    7 GFF4671 putative membrane protein no 0.55
    8 GFF5272 Various polyols ABC transporter, substrate-binding protein no 0.53
    9 GFF923 Chromosome partition protein smc no 0.53
    10 GFF1473 Amidase family protein BBta_1912 no 0.53
    11 GFF1090 Phosphohistidine phosphatase SixA no 0.52
    12 GFF2406 DipZ protein no 0.51
    13 GFF1953 hypothetical protein no 0.51
    14 GFF2586 Hydrogenase assembly protein HoxX no 0.51
    15 GFF3128 T6SS PAAR-repeat protein / RhaS protein no 0.51
    16 GFF1948 Phage integrase no 0.51
    17 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain no 0.50
    18 GFF2646 Acetyl-CoA acetyltransferase no 0.50
    19 GFF4020 Arsenic resistance protein ArsH no 0.50
    20 GFF43 hypothetical protein no 0.49

    Or look for negative cofitness