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Cofit
Protein
Homologs
Top cofit genes for GFF2212 from
Variovorax sp. SCN45
KEGG: prepilin peptidase CpaA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2050
hypothetical protein
no
0.63
2
GFF814
BUG/TctC family periplasmic protein
no
0.61
3
GFF4641
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.57
4
GFF1240
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.56
5
GFF3309
Beta-hexosaminidase (EC 3.2.1.52)
no
0.55
6
GFF6438
hypothetical protein
no
0.55
7
GFF4671
putative membrane protein
no
0.55
8
GFF5272
Various polyols ABC transporter, substrate-binding protein
no
0.53
9
GFF923
Chromosome partition protein smc
no
0.53
10
GFF1473
Amidase family protein BBta_1912
no
0.53
11
GFF1090
Phosphohistidine phosphatase SixA
no
0.52
12
GFF2406
DipZ protein
no
0.51
13
GFF1953
hypothetical protein
no
0.51
14
GFF2586
Hydrogenase assembly protein HoxX
no
0.51
15
GFF3128
T6SS PAAR-repeat protein / RhaS protein
no
0.51
16
GFF1948
Phage integrase
no
0.51
17
GFF7100
similar to protocatechuate 4,5-dioxygenase beta chain
no
0.50
18
GFF2646
Acetyl-CoA acetyltransferase
no
0.50
19
GFF4020
Arsenic resistance protein ArsH
no
0.50
20
GFF43
hypothetical protein
no
0.49
Or look for
negative cofitness