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  • Top cofit genes for GFF2211 from Variovorax sp. SCN45

    Flp pilus assembly protein RcpC/CpaB
    SEED: Flp pilus assembly protein RcpC/CpaB
    KEGG: pilus assembly protein CpaB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3148 no description no 0.61
    2 GFF6757 no description no 0.59
    3 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) no 0.59
    4 GFF1567 Demethylmenaquinone methyltransferase-like protein no 0.59
    5 GFF5047 hypothetical protein no 0.58
    6 GFF6555 no description no 0.58
    7 GFF303 Probable transcriptional regulatory protein YebC no 0.57
    8 GFF6977 Cytochrome b561 no 0.56
    9 GFF2370 L-carnitine dehydratase/bile acid-inducible protein F no 0.56
    10 GFF3557 hypothetical protein no 0.56
    11 GFF2761 Glutamine ABC transporter, permease protein GlnP no 0.55
    12 GFF4688 Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC no 0.55
    13 GFF4550 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog no 0.55
    14 GFF3177 hypothetical protein no 0.55
    15 GFF911 KEGG: transcriptional regulator no 0.55
    16 GFF3782 hypothetical protein no 0.54
    17 GFF4192 no description no 0.54
    18 GFF3228 hypothetical protein no 0.54
    19 GFF6778 possible endonuclease/exonuclease/phosphatase family protein no 0.53
    20 GFF6145 2-aminoethylphosphonate utilization transcriptional regulator, GntR family no 0.53

    Or look for negative cofitness