Top cofit genes for GFF2200 from Variovorax sp. SCN45

sigma-54-dependent transcriptional regulator
SEED: Sigma-54 dependent transcriptional regulator

Rank Hit Name Description Conserved? Cofitness  
1 GFF4230 Transcriptional regulator of pyridoxine metabolism / Pyridoxamine phosphate aminotransferase (EC 2.6.1.54) no 0.60
2 GFF7265 hypothetical protein, not 6-phosphogluconolactonase no 0.59
3 GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ no 0.57
4 GFF1396 TRAP-type C4-dicarboxylate transport system, periplasmic component no 0.56
5 GFF4678 FIG00348290: hypothetical protein no 0.54
6 GFF6560 no description no 0.53
7 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein no 0.53
8 GFF1076 no description no 0.51
9 GFF2017 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.51
10 GFF2170 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.50
11 GFF3146 no description no 0.50
12 GFF2562 UPF0391 membrane protein RGE_28580 no 0.50
13 GFF865 hypothetical protein no 0.50
14 GFF4427 hypothetical protein no 0.49
15 GFF3003 Cobalt-containing nitrile hydratase subunit alpha (EC 4.2.1.84) no 0.49
16 GFF1953 hypothetical protein no 0.48
17 GFF1336 ABC transporter, substrate-binding protein RSc1750 no 0.48
18 GFF6556 hypothetical protein no 0.48
19 GFF6658 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) no 0.47
20 GFF3904 Probable signal peptide protein no 0.47

Or look for negative cofitness