Top cofit genes for GFF22 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Methionine ABC transporter permease protein
SEED: Methionine ABC transporter permease protein
KEGG: D-methionine transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF4289		Cytoplasmic protein YaiE	no	0.70
2	GFF4166		Hemolysins and related proteins containing CBS domains	0.59	0.70
3	GFF2850		Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-)	no	0.69
4	GFF2585		SrfB	0.32	0.69
5	GFF768		Arginine ABC transporter, periplasmic arginine-binding protein ArtJ	no	0.67
6	GFF4299		Branched-chain amino acid transport system carrier protein	0.56	0.66
7	GFF121		Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	no	0.66
8	GFF2244		FIG074102: hypothetical protein	no	0.66
9	GFF4039		LysR family transcriptional regulator YafC	no	0.65
10	GFF3372		Phosphate:acyl-ACP acyltransferase PlsX	0.54	0.64
11	GFF2946		RNA polymerase sigma-54 factor RpoN	0.53	0.63
12	GFF417		Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)	0.29	0.63
13	GFF4327		tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis	0.44	0.63
14	GFF631		DamX, an inner membrane protein involved in bile resistance	0.62	0.62
15	GFF3608		Type III secretion inner membrane protein (YscQ,homologous to flagellar export components)	no	0.62
16	GFF1236		Actin-ADP-ribosyltransferase, toxin SpvB	no	0.62
17	GFF122		Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	0.76	0.62
18	GFF2436		Iron-sulfur cluster regulator IscR	no	0.62
19	GFF4741		Type III secretion transcriptional regulator HilD	no	0.61
20	GFF3007		2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	no	0.61

Or look for negative cofitness