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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF2196 from
Variovorax sp. SCN45
no description
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3847
LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24)
no
0.66
2
GFF1702
hypothetical protein
no
0.65
3
GFF4329
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.64
4
GFF1665
Nicotinamidase/isochorismatase family protein
no
0.61
5
GFF2437
hypothetical protein
no
0.61
6
GFF4145
transcriptional regulators-like protein
no
0.60
7
GFF6324
Kup system potassium uptake protein
no
0.60
8
GFF6884
FIG00932717: hypothetical protein
no
0.59
9
GFF4824
Transcriptional regulator, AraC family
no
0.59
10
GFF6657
Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system
no
0.58
11
GFF7014
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
no
0.57
12
GFF6033
Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1)
no
0.57
13
GFF5672
Dna binding response regulator PrrA (RegA)
no
0.56
14
GFF5673
Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-)
no
0.56
15
GFF160
hypothetical protein
no
0.56
16
GFF6717
hypothetical protein
no
0.56
17
GFF486
FIG00582348: hypothetical protein
no
0.56
18
GFF2841
23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190)
no
0.55
19
GFF2594
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
no
0.55
20
GFF6571
Conjugative transfer protein TrbI
no
0.55
Or look for
negative cofitness