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  • Top cofit genes for GFF2195 from Variovorax sp. SCN45

    FIG00732904: hypothetical protein
    SEED: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.64
    2 GFF1083 no description no 0.63
    3 GFF4485 FIG00715336: hypothetical protein 0.82 0.62
    4 GFF2379 Serine/threonine protein kinase 0.81 0.62
    5 GFF5001 Oxidoreductase, molybdopterin-binding no 0.62
    6 GFF6102 hypothetical protein no 0.61
    7 GFF4067 FIG00897050: hypothetical protein no 0.61
    8 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.60
    9 GFF4619 Altronate dehydratase (EC 4.2.1.7) no 0.60
    10 GFF4915 hypothetical protein no 0.60
    11 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.84 0.59
    12 GFF6890 Threonine efflux protein no 0.59
    13 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) 0.77 0.59
    14 GFF1420 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) no 0.58
    15 GFF2683 Protein containing domains DUF404, DUF407 no 0.58
    16 GFF5145 hypothetical protein no 0.58
    17 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 0.83 0.58
    18 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.72 0.58
    19 GFF2154 twitching motility protein PilJ 0.87 0.58
    20 GFF698 Transcriptional regulator, LysR family no 0.57

    Or look for negative cofitness