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  • Top cofit genes for PS417_11180 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27795 orotate phosphoribosyltransferase 0.29 0.23
    2 PS417_23770 exodeoxyribonuclease V subunit alpha no 0.21
    3 PS417_24155 ATP-binding protein no 0.21
    4 PS417_08060 proline iminopeptidase no 0.20
    5 PS417_01605 phosphoglycerate mutase 0.68 0.19
    6 PS417_20160 cysteine synthase 0.61 0.19
    7 PS417_20985 porin no 0.19
    8 PS417_06510 ATP-dependent DNA helicase DinG 0.44 0.18
    9 PS417_20060 cobyrinic acid a,c-diamide synthase no 0.18
    10 PS417_00270 alcohol dehydrogenase no 0.18
    11 PS417_08860 small component of pyruvate transporter (yjcH-like) (from data) 0.36 0.18
    12 PS417_27800 exodeoxyribonuclease III no 0.18
    13 PS417_27230 membrane protein implicated in regulation of membrane protease activity no 0.18
    14 PS417_12460 hypothetical protein no 0.18
    15 PS417_06375 deoxycytidine triphosphate deaminase no 0.18
    16 PS417_03485 type III secretion protein no 0.18
    17 PS417_05155 DNA polymerase III subunit chi 0.21 0.17
    18 PS417_08515 hypothetical protein no 0.17
    19 PS417_04885 type IV secretion protein Rhs no 0.17
    20 PS417_08205 acetyltransferase no 0.17

    Or look for negative cofitness