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  • Top cofit genes for GFF2191 from Variovorax sp. SCN45

    Pca operon transcriptional activator PcaQ
    SEED: Hypothetical Protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1690 KEGG: DNA-binding protein H-NS no 0.61
    2 GFF3224 no description no 0.59
    3 GFF2813 LSU ribosomal protein L9p no 0.58
    4 GFF7122 no description no 0.57
    5 GFF6330 BUG/TctC family periplasmic protein no 0.54
    6 GFF6565 hypothetical protein no 0.53
    7 GFF6865 Transcriptional regulator, Crp/Fnr family no 0.52
    8 GFF1066 Aspartate aminotransferase (EC 2.6.1.1) no 0.52
    9 GFF1335 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type no 0.52
    10 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.52
    11 GFF4949 ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) 0.75 0.51
    12 GFF3340 FIG00932469: hypothetical protein no 0.51
    13 GFF2756 Ribosylnicotinamide kinase (EC 2.7.1.22) no 0.50
    14 GFF893 FIG138928: iron-regulated membrane protein no 0.50
    15 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.50
    16 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.18 0.49
    17 GFF1932 no description no 0.49
    18 GFF3152 hypothetical protein no 0.49
    19 GFF3159 Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6) no 0.49
    20 GFF5119 Ammonium transporter no 0.49

    Or look for negative cofitness