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  • Top cofit genes for GFF2184 from Variovorax sp. SCN45

    VWA containing CoxE family protein
    SEED: carbon monoxide dehydrogenase E protein
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5805 Putative transmembrane protein no 0.64
    2 GFF3981 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.63
    3 GFF5390 RecA protein 0.25 0.63
    4 GFF4775 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.60
    5 GFF7059 Zinc uptake regulation protein Zur no 0.58
    6 GFF3611 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.25 0.56
    7 GFF6571 Conjugative transfer protein TrbI no 0.55
    8 GFF348 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.55
    9 GFF735 no description no 0.55
    10 GFF6268 BUG/TctC family periplasmic protein no 0.52
    11 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.52
    12 GFF1758 KEGG: carboxymethylenebutenolidase no 0.52
    13 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) 0.37 0.52
    14 GFF3547 no description no 0.52
    15 GFF5540 FIG01201438: hypothetical protein no 0.51
    16 GFF7020 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.51
    17 GFF703 Efflux ABC transporter, permease/ATP-binding protein Atu2242 0.31 0.51
    18 GFF1096 Phosphate transport system regulatory protein PhoU no 0.51
    19 GFF2205 hypothetical protein no 0.51
    20 GFF929 Transcriptional regulator, IclR family no 0.50

    Or look for negative cofitness