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  • Top cofit genes for PS417_11130 from Pseudomonas simiae WCS417

    peptide ABC transporter substrate-binding protein
    SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00130 SulP family inorganic anion transporter 0.54 0.22
    2 PS417_19965 histidine kinase no 0.19
    3 PS417_01040 RND transporter no 0.19
    4 PS417_15170 long-chain fatty acid--CoA ligase no 0.19
    5 PS417_26270 AraC family transcriptional regulator no 0.18
    6 PS417_17205 LysR family transcriptional regulator no 0.18
    7 PS417_13295 TetR family transcriptional regulator no 0.18
    8 PS417_19950 ATP-dependent DNA helicase RecQ 0.53 0.17
    9 PS417_24295 carbon starvation protein A no 0.17
    10 PS417_24460 hypothetical protein no 0.17
    11 PS417_14555 AsnC family transcriptional regulator no 0.17
    12 PS417_24810 aldehyde dehydrogenase 0.40 0.17
    13 PS417_26160 hypothetical protein no 0.17
    14 PS417_01265 CbbBc protein no 0.16
    15 PS417_01570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase no 0.16
    16 PS417_05760 phage tail protein no 0.16
    17 PS417_26555 endoribonuclease L-PSP no 0.16
    18 PS417_01710 histidine utilization repressor no 0.16
    19 PS417_01565 imidazole glycerol phosphate synthase no 0.16
    20 PS417_21750 acetyl-CoA synthetase no 0.16

    Or look for negative cofitness