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  • Top cofit genes for GFF2173 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) no 0.63
    2 GFF3173 Transcriptional regulator, IclR family no 0.62
    3 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) no 0.60
    4 GFF665 hypothetical protein no 0.59
    5 GFF4611 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family no 0.58
    6 GFF701 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.58
    7 GFF1524 FIG006045: Sigma factor, ECF subfamily no 0.57
    8 GFF6653 Aminotransferase, class III no 0.57
    9 GFF5361 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases no 0.57
    10 GFF1797 FIG022199: FAD-binding protein no 0.57
    11 GFF7376 Transcriptional regulator, LysR family no 0.57
    12 GFF4469 Cell division protein FtsA no 0.57
    13 GFF4851 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.56
    14 GFF1900 Transcriptional regulator, LysR family no 0.56
    15 GFF2772 Site-specific tyrosine recombinase XerD no 0.56
    16 GFF2838 hypothetical protein no 0.56
    17 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) no 0.56
    18 GFF7282 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) no 0.55
    19 GFF401 PhbF no 0.55
    20 GFF3958 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) no 0.55

    Or look for negative cofitness