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  • Top cofit genes for PS417_11025 from Pseudomonas simiae WCS417

    sugar ABC transporter substrate-binding protein
    SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
    KEGG: L-arabinose transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26050 response regulator no 0.26
    2 PS417_17240 trigger factor no 0.25
    3 PS417_11000 L-arabonate dehydratase (EC 4.2.1.25) (from data) 0.78 0.25
    4 PS417_05785 tail protein no 0.25
    5 PS417_16500 arginyl-tRNA-protein transferase no 0.24
    6 PS417_11010 FAH family protein 0.75 0.24
    7 PS417_12180 ABC transporter substrate-binding protein no 0.24
    8 PS417_11005 L-arabinose transporter (from data) 0.80 0.23
    9 PS417_12200 microcin ABC transporter permease no 0.22
    10 PS417_21240 hypothetical protein no 0.21
    11 PS417_02910 precorrin-2 C20-methyltransferase no 0.20
    12 PS417_12660 hypothetical protein no 0.20
    13 PS417_03015 hypothetical protein no 0.20
    14 PS417_27080 penicillin amidase no 0.19
    15 PS417_23890 ATPase 0.20 0.19
    16 PS417_13995 NADP-dependent oxidoreductase no 0.19
    17 PS417_21840 chemotaxis protein no 0.19
    18 PS417_15050 3-methyladenine DNA glycosylase no 0.19
    19 PS417_17835 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase no 0.19
    20 PS417_11045 3-oxoacyl-ACP reductase 0.60 0.19

    Or look for negative cofitness