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  • Top cofit genes for PS417_11005 from Pseudomonas simiae WCS417

    L-arabinose transporter (from data)
    Original annotation: MFS transporter
    SEED: Nitrate/nitrite transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11010 FAH family protein 0.99 0.59
    2 PS417_11030 L-arabinose transporter ATP-binding protein 0.89 0.49
    3 PS417_11000 L-arabonate dehydratase (EC 4.2.1.25) (from data) 0.96 0.48
    4 PS417_11015 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) 0.96 0.45
    5 PS417_11045 3-oxoacyl-ACP reductase 0.81 0.42
    6 PS417_11020 L-arabinolactonase (EC 3.1.1.15) (from data) 0.86 0.36
    7 PS417_21020 phosphoenolpyruvate synthase 0.68 0.26
    8 PS417_11025 sugar ABC transporter substrate-binding protein 0.80 0.23
    9 PS417_21335 sugar ABC transporter substrate-binding protein no 0.22
    10 PS417_21330 L-arabinose transporter ATP-binding protein no 0.18
    11 PS417_21340 short-chain dehydrogenase 0.62 0.17
    12 PS417_07735 cephalosporin hydroxylase no 0.16
    13 PS417_24570 AsnC family transcriptional regulator no 0.15
    14 PS417_01180 ribosomal protein S6 modification protein no 0.15
    15 PS417_23350 LysR family transcriptional regulator no 0.15
    16 PS417_05570 DeoR faimly transcriptional regulator no 0.15
    17 PS417_19495 N-acyl-L-amino acid amidohydrolase no 0.14
    18 PS417_03235 xanthine permease XanP no 0.14
    19 PS417_24505 membrane protein no 0.14
    20 PS417_12245 GNAT family acetyltransferase no 0.14

    Or look for negative cofitness