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  • Top cofit genes for GFF2155 from Variovorax sp. SCN45

    Signal transduction histidine kinase CheA
    SEED: Signal transduction histidine kinase CheA (EC 2.7.3.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3886 Putative transmembrane protein no 0.96
    2 GFF5415 Type IV fimbrial biogenesis protein PilV no 0.95
    3 GFF5417 hypothetical protein no 0.95
    4 GFF2509 Type IV fimbrial assembly protein PilC no 0.95
    5 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.95
    6 GFF5419 Type IV pilus biogenesis protein PilE no 0.95
    7 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.95
    8 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.95
    9 GFF5414 hypothetical protein no 0.95
    10 GFF5319 Type IV pilus biogenesis protein PilM no 0.95
    11 GFF5321 Type IV pilus biogenesis protein PilO no 0.95
    12 GFF2154 twitching motility protein PilJ no 0.94
    13 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.94
    14 GFF6290 RNA polymerase sigma-54 factor RpoN no 0.94
    15 GFF5323 Type IV pilus biogenesis protein PilQ no 0.94
    16 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.94
    17 GFF4432 Two-component system response regulator protein no 0.94
    18 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.94
    19 GFF2510 Type IV fimbrial assembly, ATPase PilB no 0.94
    20 GFF5320 Type IV pilus biogenesis protein PilN no 0.94

    Or look for negative cofitness