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  • Top cofit genes for PS417_10970 from Pseudomonas simiae WCS417

    effector protein
    SEED: probable membrane protein STY1534
    KEGG: putative membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03310 carbonate dehydratase no 0.23
    2 PS417_27435 polyphosphate kinase 0.61 0.21
    3 PS417_14800 diguanylate cyclase no 0.21
    4 PS417_12830 LysR family transcriptional regulator no 0.20
    5 PS417_03520 secretin no 0.20
    6 PS417_03045 hypothetical protein no 0.20
    7 PS417_13510 polyketide cyclase no 0.20
    8 PS417_02915 precorrin-3B C17-methyltransferase no 0.19
    9 PS417_06645 RNA polymerase-associated protein RapA no 0.19
    10 PS417_20675 hydroxyacylglutathione hydrolase no 0.19
    11 PS417_20380 hypothetical protein no 0.19
    12 PS417_20840 hypothetical protein no 0.19
    13 PS417_22160 3-beta hydroxysteroid dehydrogenase no 0.19
    14 PS417_26840 TetR family transcriptional regulator no 0.18
    15 PS417_01570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.11 0.18
    16 PS417_20535 peptidylprolyl isomerase no 0.18
    17 PS417_09965 hypothetical protein no 0.18
    18 PS417_09270 BCCT transporter no 0.18
    19 PS417_18455 hypothetical protein no 0.18
    20 PS417_18590 SAM-dependent methyltransferase no 0.18

    Or look for negative cofitness