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  • Top cofit genes for PS417_10960 from Pseudomonas simiae WCS417

    quinate dehydrogenase
    SEED: Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25)
    KEGG: quinate dehydrogenase (quinone)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11840 GntR family transcriptional regulator no 0.25
    2 PS417_14760 membrane protein no 0.23
    3 PS417_03910 pilus assembly protein no 0.22
    4 PS417_26080 TonB-dependent receptor no 0.21
    5 PS417_22325 amino acid APC transporter no 0.21
    6 PS417_00270 alcohol dehydrogenase 0.36 0.21
    7 PS417_15665 hypothetical protein no 0.21
    8 PS417_28530 iron transporter 0.43 0.21
    9 PS417_16070 TonB-dependent receptor 0.40 0.21
    10 PS417_22320 amino acid APC transporter no 0.20
    11 PS417_00620 GntR family transcriptional regulator 0.62 0.20
    12 PS417_25060 O-antigen polymerase no 0.20
    13 PS417_13765 histidine kinase no 0.20
    14 PS417_19105 hypothetical protein no 0.20
    15 PS417_05940 spermidine/putrescine ABC transporter substrate-binding protein no 0.20
    16 PS417_24935 hypothetical protein no 0.20
    17 PS417_15575 histidine kinase no 0.20
    18 PS417_10125 hypothetical protein no 0.19
    19 PS417_04785 hypothetical protein no 0.19
    20 PS417_15585 DNA repair nucleotidyltransferase no 0.19

    Or look for negative cofitness