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  • Top cofit genes for PS417_10945 from Pseudomonas simiae WCS417

    Xylose isomerase (EC 5.3.1.5) (from data)
    Original annotation: xylose isomerase
    SEED: Xylose isomerase (EC 5.3.1.5)
    KEGG: xylose isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_10950 AraC family transcriptional regulator 0.95 0.53
    2 PS417_12690 xylulose kinase 0.98 0.18
    3 PS417_11040 aldose epimerase 0.81 0.17
    4 PS417_09725 transporter 0.57 0.15
    5 PS417_05300 glucose dehydrogenase 0.27 0.14
    6 PS417_06980 membrane protein no 0.14
    7 PS417_05875 acetyltransferase no 0.14
    8 PS417_07140 peptidase M48 no 0.14
    9 PS417_03675 hypothetical protein 0.31 0.13
    10 PS417_27815 hypothetical protein 0.77 0.13
    11 PS417_09700 transaldolase no 0.13
    12 PS417_10935 xylose transporter 0.92 0.13
    13 PS417_21100 alpha-L-glutamate ligase no 0.13
    14 PS417_06015 hypothetical protein no 0.13
    15 PS417_09705 hypothetical protein 0.46 0.13
    16 PS417_24430 3-dehydroquinate dehydratase no 0.12
    17 PS417_16095 amidohydrolase no 0.12
    18 PS417_09720 methyltransferase no 0.12
    19 PS417_03670 MerR family transcriptional regulator no 0.12
    20 PS417_22675 histidine kinase 0.44 0.12

    Or look for negative cofitness