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  • Top cofit genes for PS417_10940 from Pseudomonas simiae WCS417

    sugar ABC transporter substrate-binding protein
    SEED: Xylose ABC transporter, periplasmic xylose-binding protein XylF
    KEGG: D-xylose transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01370 peptidase M48 no 0.20
    2 PS417_07035 uracil-DNA glycosylase no 0.19
    3 PS417_17580 citrulline utilization hydrolase (from data) no 0.19
    4 PS417_26270 AraC family transcriptional regulator 0.30 0.18
    5 PS417_13110 methylase no 0.18
    6 PS417_13725 membrane protein no 0.18
    7 PS417_16385 hypothetical protein no 0.18
    8 PS417_07860 hypothetical protein no 0.18
    9 PS417_22840 tRNA-Met no 0.18
    10 PS417_09160 GNAT family acetyltransferase no 0.17
    11 PS417_23005 XRE family transcriptional regulator no 0.17
    12 PS417_26470 cytochrome C 0.58 0.17
    13 PS417_17205 LysR family transcriptional regulator no 0.17
    14 PS417_27225 protease no 0.17
    15 PS417_16560 GNAT family acetyltransferase no 0.17
    16 PS417_19060 NADPH:quinone oxidoreductase no 0.16
    17 PS417_23825 penicillin-binding protein no 0.16
    18 PS417_18350 hypothetical protein no 0.16
    19 PS417_03285 chromosome partitioning protein no 0.16
    20 PS417_21085 GntR family transcriptional regulator 0.32 0.16

    Or look for negative cofitness