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  • Top cofit genes for PS417_10930 from Pseudomonas simiae WCS417

    D-xylose ABC transporter permease
    SEED: Xylose ABC transporter, permease protein XylH
    KEGG: D-xylose transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17150 phosphonoacetaldehyde hydrolase 0.50 0.25
    2 PS417_28165 GntR family transcriptional regulator 0.54 0.21
    3 PS417_18080 general secretion pathway protein GspF no 0.19
    4 PS417_16785 ABC transporter permease no 0.19
    5 PS417_23700 aromatic amino acid transporter 0.38 0.19
    6 PS417_22875 hypothetical protein 0.11 0.19
    7 PS417_04445 cupin 0.59 0.18
    8 PS417_03560 GTP-binding protein no 0.18
    9 PS417_11660 acylamide amidohydrolase no 0.18
    10 PS417_07190 MFS transporter no 0.17
    11 PS417_23655 AsnC family transcriptional regulator no 0.17
    12 PS417_12775 GntR family transcriptional regulator 0.37 0.17
    13 PS417_09035 hypothetical protein no 0.17
    14 PS417_24145 hypothetical protein no 0.17
    15 PS417_26760 oxidase 0.34 0.17
    16 PS417_08020 LysR family transcriptional regulator no 0.17
    17 PS417_07275 5-carboxymethyl-2-hydroxymuconate isomerase no 0.17
    18 PS417_08250 competence protein ComEA no 0.17
    19 PS417_02950 tRNA-dihydrouridine synthase B 0.33 0.16
    20 PS417_20205 LysR family transcriptional regulator no 0.16

    Or look for negative cofitness