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Cofit
Protein
Homologs
Top cofit genes for GFF2143 from
Sphingobium sp. HT1-2
UPF0118 membrane protein SMc00793
SEED: transport protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1923
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
no
0.85
2
GFF4581
CzcABC family efflux RND transporter, transmembrane protein
no
0.84
3
GFF762
Undecaprenyl-diphosphatase (EC 3.6.1.27)
no
0.82
4
GFF5056
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
no
0.82
5
GFF4580
CzcABC family efflux RND transporter, membrane fusion protein
no
0.82
6
GFF2573
Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7)
no
0.81
7
GFF1899
hypothetical protein
no
0.81
8
GFF1920
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
no
0.81
9
GFF827
'Alpha-ribazole-5'-phosphate phosphatase' transl_table=11
0.27
0.79
10
GFF3282
hypothetical protein
no
0.78
11
GFF1798
hypothetical protein
no
0.77
12
GFF1386
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 / 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2
no
0.77
13
GFF3029
hypothetical protein
no
0.77
14
GFF356
Sulfur carrier protein ThiS / Thiazole synthase (EC 2.8.1.10)
no
0.76
15
GFF1921
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
no
0.76
16
GFF4126
ABC transporter involved in resistance to organic solvents, substrate-binding protein 2
no
0.76
17
GFF404
Aminodeoxychorismate lyase (EC 4.1.3.38)
no
0.76
18
GFF5381
LSU rRNA ## 23S rRNA, large subunit ribosomal RNA
no
0.75
19
GFF2749
Hybrid sensory histidine kinase
no
0.75
20
GFF3167
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.75
Or look for
negative cofitness