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  • Top cofit genes for GFF2140 from Variovorax sp. SCN45

    Ribose ABC transporter, substrate-binding protein RbsB (TC 3.A.1.2.1)
    SEED: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
    KEGG: ribose transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1347 Dabb no 0.48
    2 GFF1035 no description no 0.44
    3 GFF2662 Deacetylases, including yeast histone deacetylase and acetoin utilization protein no 0.42
    4 GFF5016 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.42
    5 GFF3315 Cu(I)-responsive transcriptional regulator no 0.42
    6 GFF746 BUG/TctC family periplasmic protein no 0.40
    7 GFF937 Biotin synthase (EC 2.8.1.6) no 0.40
    8 GFF3724 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.39
    9 GFF5766 Chemotaxis protein CheD no 0.39
    10 GFF3138 VgrG protein 0.65 0.39
    11 GFF5639 Death on curing protein, Doc toxin no 0.39
    12 GFF7006 Flagellar biosynthesis protein FliR no 0.39
    13 GFF3065 hypothetical protein no 0.38
    14 GFF5482 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system no 0.38
    15 GFF4873 no description no 0.38
    16 GFF1699 hypothetical protein no 0.38
    17 GFF3106 Hydrolase, alpha/beta fold family no 0.37
    18 GFF3970 Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13) no 0.37
    19 GFF3374 no description no 0.37
    20 GFF6029 BUG/TctC family periplasmic protein no 0.37

    Or look for negative cofitness