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  • Top cofit genes for GFF2139 from Hydrogenophaga sp. GW460-11-11-14-LB1

    transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1814 Glutathione S-transferase (EC 2.5.1.18) no 0.47
    2 GFF2008 D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) no 0.46
    3 GFF29 Transcriptional regulator, MarR family no 0.43
    4 GFF4665 Putative deoxyribonuclease YcfH no 0.43
    5 GFF5480 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA no 0.41
    6 GFF832 hypothetical protein no 0.41
    7 GFF3775 Chlorogenate esterase no 0.41
    8 GFF1747 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.48 0.40
    9 GFF1666 Holliday junction DNA helicase RuvA no 0.39
    10 GFF1912 integral membrane protein no 0.39
    11 GFF366 Probable transmembrane protein no 0.39
    12 GFF125 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.38
    13 GFF4523 FIG000859: hypothetical protein YebC no 0.38
    14 GFF2232 FIG00571894: hypothetical protein no 0.37
    15 GFF3381 hypothetical protein no 0.37
    16 GFF322 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) no 0.37
    17 GFF4529 LSU m3Psi1915 methyltransferase RlmH no 0.37
    18 GFF578 Putative esterase, FIGfam005057 0.47 0.36
    19 GFF536 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein no 0.36
    20 GFF3382 Aconitate hydratase (EC 4.2.1.3) no 0.36

    Or look for negative cofitness