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  • Top cofit genes for GFF2138 from Variovorax sp. SCN45

    Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1)
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: ribose transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1672 BUG/TctC family periplasmic protein no 0.52
    2 GFF1112 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.50
    3 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.49
    4 GFF7167 Pirin no 0.49
    5 GFF3032 Two-component transcriptional response regulator, LuxR family no 0.49
    6 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.48
    7 GFF954 hypothetical protein no 0.47
    8 GFF1085 no description no 0.47
    9 GFF6902 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.47
    10 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.46
    11 GFF2406 DipZ protein no 0.45
    12 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.44
    13 GFF5542 no description no 0.44
    14 GFF7141 FIG00537874: hypothetical protein no 0.44
    15 GFF2886 Metallo-beta-lactamase superfamily protein PA0057 0.35 0.43
    16 GFF2999 Putative transmembrane protein no 0.43
    17 GFF2250 Putative stomatin/prohibitin-family membrane protease subunit aq_911 no 0.42
    18 GFF2559 hypothetical protein no 0.42
    19 GFF7101 hypothetical protein no 0.42
    20 GFF6799 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) 0.29 0.42

    Or look for negative cofitness