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    • Top cofit genes for GFF2121 from Variovorax sp. SCN45

    Type IV fimbrial biogenesis protein PilY1
    SEED: Type IV fimbrial biogenesis protein PilY1

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6072 Transcriptional regulator, LysR family no 0.50
    2 GFF1037 putative membrane protein no 0.48
    3 GFF2493 YheO-like PAS domain no 0.48
    4 GFF6563 no description no 0.48
    5 GFF4196 no description no 0.48
    6 GFF5111 Permease of the drug/metabolite transporter (DMT) superfamily no 0.47
    7 GFF749 4-oxalomesaconate hydratase (EC 4.2.1.83) no 0.47
    8 GFF5453 Alkaline phosphatase (EC 3.1.3.1) no 0.46
    9 GFF4536 Tetrapartite efflux system component, FusD-like no 0.45
    10 GFF4578 Electron transfer flavoprotein, alpha subunit no 0.45
    11 GFF1663 Isocitrate lyase (EC 4.1.3.1) no 0.45
    12 GFF2727 Outer membrane protein romA no 0.45
    13 GFF7258 Transcriptional regulator, IclR family no 0.44
    14 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.44
    15 GFF6508 hypothetical protein no 0.44
    16 GFF500 Lysine exporter protein (LYSE/YGGA) no 0.44
    17 GFF7389 Cyclohexanone monooxygenase (EC 1.14.13.22) no 0.44
    18 GFF6165 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.43
    19 GFF542 no description no 0.43
    20 GFF3192 hypothetical protein no 0.43

    Or look for negative cofitness