Top cofit genes for GFF2119 from Variovorax sp. SCN45

Type IV fimbrial biogenesis protein PilW
KEGG: type IV pilus assembly protein PilW

Rank Hit Name Description Conserved? Cofitness  
1 GFF436 LrgA-associated membrane protein LrgB no 0.64
2 GFF571 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) no 0.58
3 GFF2266 FIG00441126: hypothetical protein no 0.56
4 GFF3199 Ser/Thr protein phosphatase family protein no 0.55
5 GFF4884 UPF0380 proteins YafZ and homologs no 0.55
6 GFF56 hypothetical protein no 0.55
7 GFF2223 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.54
8 GFF3782 hypothetical protein no 0.50
9 GFF6773 Transcriptional regulator, GntR family no 0.49
10 GFF2667 COG4339 metal-dependent phosphohydrolase, HD superfamily no 0.48
11 GFF3472 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) no 0.48
12 GFF136 Uncharacterized MFS-type transporter 0.53 0.47
13 GFF3200 hypothetical protein no 0.47
14 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.47
15 GFF2675 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) no 0.46
16 GFF6739 Putative diheme cytochrome c-553 no 0.46
17 GFF3606 Similarities with probable transcriptional regulator LumQ no 0.46
18 GFF1040 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.46
19 GFF1705 ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) / C-terminal AAA-associated domain no 0.46
20 GFF3557 hypothetical protein no 0.45

Or look for negative cofitness