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  • Top cofit genes for GFF2104 from Variovorax sp. SCN45

    3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
    SEED: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7243 HtrA protease/chaperone protein no 0.54
    2 GFF1684 no description no 0.48
    3 GFF4209 no description no 0.48
    4 GFF2267 Integral membrane protein no 0.46
    5 GFF7240 Polyhydroxyalkanoic acid synthase no 0.45
    6 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.45
    7 GFF5580 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) no 0.45
    8 GFF6546 hypothetical protein no 0.45
    9 GFF890 Two-component system sensor histidine kinase no 0.43
    10 GFF4405 hypothetical protein no 0.41
    11 GFF2012 Putative transmembrane protein no 0.40
    12 GFF6521 Auxin efflux carrier family protein no 0.39
    13 GFF4023 no description no 0.39
    14 GFF7353 1,2-phenylacetyl-CoA epoxidase, subunit C (EC 1.14.13.149) no 0.39
    15 GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.39
    16 GFF4842 Conjugative transfer protein TrbG no 0.38
    17 GFF1526 putative transmembrane sensor no 0.38
    18 GFF6977 Cytochrome b561 no 0.38
    19 GFF3482 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.37
    20 GFF2291 Nodulation protein N-related dehydratase no 0.37

    Or look for negative cofitness