• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF2100 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF50 Murein hydrolase activator NlpD no 0.66
    2 GFF1788 hypothetical protein no 0.62
    3 GFF6030 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.62
    4 GFF3963 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) no 0.61
    5 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) no 0.59
    6 GFF5191 Galactose-binding protein regulator no 0.59
    7 GFF4632 Glycosyl transferase, family 2 no 0.59
    8 GFF4851 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.58
    9 GFF6580 CopG domain-containing protein no 0.58
    10 GFF1779 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) no 0.57
    11 GFF799 Rrf2 family transcriptional regulator, group III no 0.57
    12 GFF4499 Uncharacterized DUF1427 protein PA2697 no 0.57
    13 GFF6421 ATPase, AAA family no 0.56
    14 GFF5023 Ammonium transporter no 0.56
    15 GFF1256 Probable NADH dehydrogenase/NAD(P)H nitroreductase no 0.56
    16 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) no 0.56
    17 GFF6330 BUG/TctC family periplasmic protein no 0.55
    18 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.55
    19 GFF1470 Putative transposase InsK for insertion sequence element IS150 no 0.55
    20 GFF6653 Aminotransferase, class III no 0.55

    Or look for negative cofitness