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  • Top cofit genes for GFF21 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7020 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.71
    2 GFF2258 4-hydroxybenzoate transporter no 0.64
    3 GFF2049 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) no 0.63
    4 GFF6997 Flagellar basal-body rod protein FlgC no 0.60
    5 GFF585 no description no 0.60
    6 GFF6891 Phenazine biosynthesis protein PhzF like no 0.57
    7 GFF3413 Thioredoxin reductase (EC 1.8.1.9) no 0.57
    8 GFF6349 no description no 0.56
    9 GFF5795 esterase, PHB depolymerase family no 0.56
    10 GFF6425 no description no 0.56
    11 GFF713 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.79) no 0.55
    12 GFF6030 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.54
    13 GFF6865 Transcriptional regulator, Crp/Fnr family no 0.54
    14 GFF5965 hypothetical protein no 0.54
    15 GFF7145 Transcriptional regulator, GntR family no 0.53
    16 GFF2164 Transcriptional regulator, IclR family no 0.53
    17 GFF1758 KEGG: carboxymethylenebutenolidase no 0.53
    18 GFF3301 Lignostilbene-alpha,beta-dioxygenase and related enzymes no 0.53
    19 GFF1098 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) no 0.53
    20 GFF1468 Transcriptional regulator, GntR family no 0.53

    Or look for negative cofitness