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  • Top cofit genes for GFF2088 from Variovorax sp. SCN45

    Putative lipase in cluster with Phosphatidate cytidylyltransferase
    SEED: Putative lipase in cluster with Phosphatidate cytidylyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1656 hypothetical protein 0.22 0.56
    2 GFF1021 Transcriptional regulator, Xre-family with cupin domain no 0.56
    3 GFF3673 no description 0.30 0.56
    4 GFF3823 FIG00581576: hypothetical protein no 0.54
    5 GFF1823 Mg(2+)-transport-ATPase-associated protein MgtC no 0.54
    6 GFF3368 Pyrimidine permease 0.53 0.53
    7 GFF5858 heme uptake regulator no 0.53
    8 GFF2645 Acyl dehydratase no 0.53
    9 GFF1822 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.52
    10 GFF5971 hypothetical protein no 0.52
    11 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) no 0.52
    12 GFF6709 Putative hemagglutinin-related protein no 0.52
    13 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.51
    14 GFF3915 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain no 0.51
    15 GFF5291 Ferrichrome-iron receptor 0.36 0.50
    16 GFF4256 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) no 0.50
    17 GFF6119 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.50
    18 GFF507 Hydrolase, alpha/beta fold family no 0.50
    19 GFF5347 hypothetical protein no 0.50
    20 GFF5770 Flagellar biosynthesis protein FlhB 0.19 0.49

    Or look for negative cofitness