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  • Top cofit genes for PS417_10565 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22965 DNA mismatch repair protein MutT 0.47 0.30
    2 PS417_24220 hypothetical protein 0.61 0.26
    3 PS417_05980 chemotaxis protein CheA no 0.25
    4 PS417_19185 toxin no 0.25
    5 PS417_14880 thioesterase no 0.24
    6 PS417_24680 murein transglycosylase no 0.24
    7 PS417_10560 choline dehydrogenase 0.88 0.24
    8 PS417_18975 GntR family transcriptional regulator no 0.24
    9 PS417_15100 BatB protein 0.28 0.24
    10 PS417_09670 AraC family transcriptional regulator no 0.23
    11 PS417_09640 capsular biosynthesis protein no 0.23
    12 PS417_02125 cobalamin biosynthesis protein CobQ no 0.22
    13 PS417_26940 phosphonate ABC transporter permease 0.37 0.21
    14 PS417_26130 membrane protein no 0.21
    15 PS417_01895 poly(R)-hydroxyalkanoic acid synthase 0.46 0.21
    16 PS417_27215 hypothetical protein no 0.20
    17 PS417_27610 hypothetical protein 0.26 0.20
    18 PS417_09635 mannose-1-phosphate guanylyltransferase no 0.20
    19 PS417_19935 hypothetical protein 0.50 0.19
    20 PS417_25350 biotin carboxylase no 0.19

    Or look for negative cofitness