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  • Top cofit genes for PS417_10560 from Pseudomonas simiae WCS417

    choline dehydrogenase
    SEED: Choline dehydrogenase (EC 1.1.99.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22965 DNA mismatch repair protein MutT no 0.35
    2 PS417_22805 hypothetical protein no 0.28
    3 PS417_10565 LysR family transcriptional regulator 0.88 0.24
    4 PS417_16355 hypothetical protein no 0.22
    5 PS417_14435 transcriptional regulator 0.16 0.20
    6 PS417_27200 acetylornithine deacetylase no 0.20
    7 PS417_24680 murein transglycosylase 0.32 0.20
    8 PS417_15920 TetR family transcriptional regulator no 0.19
    9 PS417_02735 bacterioferritin no 0.19
    10 PS417_19780 anti-anti-sigma factor 0.30 0.19
    11 PS417_08760 metalloprotease no 0.18
    12 PS417_26105 ABC transporter permease 0.12 0.18
    13 PS417_00730 NADH:ubiquinone oxidoreductase subunit N 0.60 0.17
    14 PS417_21420 aminodeoxychorismate lyase no 0.17
    15 PS417_20975 protein kinase no 0.17
    16 PS417_11600 urea ABC transporter permease 0.36 0.17
    17 PS417_18450 hydrolase no 0.17
    18 PS417_15470 saccharopine dehydrogenase no 0.17
    19 PS417_23745 hypothetical protein 0.32 0.17
    20 PS417_16075 diguanylate cyclase 0.18 0.16

    Or look for negative cofitness