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  • Top cofit genes for PS417_10540 from Pseudomonas simiae WCS417

    NAD-dependent deacetylase
    SEED: NAD-dependent protein deacetylase of SIR2 family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06100 SAM-dependent methyltransferase no 0.22
    2 PS417_21065 3-methylitaconate isomerase 0.41 0.21
    3 PS417_25705 lipoate--protein ligase no 0.21
    4 PS417_07000 hypothetical protein no 0.20
    5 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.40 0.20
    6 PS417_05705 pyocin R2, holin no 0.20
    7 PS417_11325 hypothetical protein no 0.20
    8 PS417_27210 AsnC family transcriptional regulator no 0.19
    9 PS417_10530 LysR family transcriptional regulator no 0.19
    10 PS417_16960 fimbrial protein no 0.19
    11 PS417_15705 nitrate reductase 0.64 0.19
    12 PS417_07220 LysR family transcriptional regulator no 0.18
    13 PS417_23730 LysR family transcriptional regulator no 0.18
    14 PS417_15215 protein activator of alkane oxidation PraA no 0.18
    15 PS417_00900 4-aminobutyrate aminotransferase no 0.18
    16 PS417_07635 transcription-repair coupling factor 0.52 0.17
    17 PS417_13195 RND transporter MFP subunit no 0.17
    18 PS417_20255 copper resistance protein CopB no 0.17
    19 PS417_13520 hypothetical protein no 0.17
    20 PS417_14480 glycogen synthase 0.51 0.17

    Or look for negative cofitness