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Cofit
Protein
Homologs
Top cofit genes for PS417_10530 from
Pseudomonas simiae WCS417
LysR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_22960
hypothetical protein
0.18
0.34
2
PS417
_10515
acetyl-CoA acetyltransferase
0.45
0.34
3
PS417
_10520
succinyl-CoA:3-ketoacid-CoA transferase
0.75
0.33
4
PS417
_07245
2-deoxy-D-ribonate 3-dehydrogenase
(from data)
no
0.32
5
PS417
_13975
CdaR family transcriptional regulator
no
0.31
6
PS417
_07265
2-deoxy-D-ribonate transporter 1
(from data)
no
0.30
7
PS417
_13970
glycerate kinase
no
0.30
8
PS417
_07250
2-deoxy-3-keto-D-ribonoate cleavage enzyme
(from data)
no
0.29
9
PS417
_07260
2-deoxy-D-ribonate transporter 2
(from data)
no
0.27
10
PS417
_07240
Transcriptional regulator of deoxyribose catabolism
(from data)
no
0.22
11
PS417
_07255
Deoxyribonolactonase
(from data)
no
0.21
12
PS417
_05610
bacterioferritin
no
0.20
13
PS417
_10540
NAD-dependent deacetylase
no
0.19
14
PS417
_01200
phosphoesterase
no
0.19
15
PS417
_22045
peptide deformylase
no
0.18
16
PS417
_19155
DSBA oxidoreductase
no
0.18
17
PS417
_27665
diguanylate cyclase
no
0.18
18
PS417
_03550
hypothetical protein
no
0.18
19
PS417
_25115
lipopolysaccharide biosynthesis protein
0.31
0.17
20
PS417
_12055
xylitol ABC transporter, substrate-binding component
(from data)
no
0.17
Or look for
negative cofitness