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  • Top cofit genes for PS417_10530 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22960 hypothetical protein 0.18 0.34
    2 PS417_10515 acetyl-CoA acetyltransferase 0.45 0.34
    3 PS417_10520 succinyl-CoA:3-ketoacid-CoA transferase 0.75 0.33
    4 PS417_07245 2-deoxy-D-ribonate 3-dehydrogenase (from data) no 0.32
    5 PS417_13975 CdaR family transcriptional regulator no 0.31
    6 PS417_07265 2-deoxy-D-ribonate transporter 1 (from data) no 0.30
    7 PS417_13970 glycerate kinase no 0.30
    8 PS417_07250 2-deoxy-3-keto-D-ribonoate cleavage enzyme (from data) no 0.29
    9 PS417_07260 2-deoxy-D-ribonate transporter 2 (from data) no 0.27
    10 PS417_07240 Transcriptional regulator of deoxyribose catabolism (from data) no 0.22
    11 PS417_07255 Deoxyribonolactonase (from data) no 0.21
    12 PS417_05610 bacterioferritin no 0.20
    13 PS417_10540 NAD-dependent deacetylase no 0.19
    14 PS417_01200 phosphoesterase no 0.19
    15 PS417_22045 peptide deformylase no 0.18
    16 PS417_19155 DSBA oxidoreductase no 0.18
    17 PS417_27665 diguanylate cyclase no 0.18
    18 PS417_03550 hypothetical protein no 0.18
    19 PS417_25115 lipopolysaccharide biosynthesis protein 0.31 0.17
    20 PS417_12055 xylitol ABC transporter, substrate-binding component (from data) no 0.17

    Or look for negative cofitness