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  • Top cofit genes for GFF2058 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Sulfate transport system permease protein CysT
    SEED: Sulfate transport system permease protein CysT
    KEGG: sulfate transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4457 Fimbriae W protein no 0.63
    2 GFF2974 Outer membrane stress sensor protease DegQ, serine protease no 0.48
    3 GFF202 Probable electron transfer flavoprotein-quinone oxidoreductase FixC (EC 1.5.5.-) no 0.46
    4 GFF1252 hypothetical protein no 0.46
    5 GFF2059 Sulfate and thiosulfate binding protein CysP 0.98 0.45
    6 GFF2352 Outer membrane vitamin B12 receptor BtuB no 0.43
    7 GFF371 DNA repair protein RadC 0.33 0.42
    8 GFF3992 Outer membrane protein C precursor no 0.42
    9 GFF2579 Transcriptional regulator, GntR family no 0.41
    10 GFF2620 FIG01045674: hypothetical protein no 0.41
    11 GFF3081 Unknown, probable amino acid transporter 0.57 0.41
    12 GFF4689 Phage tail fiber protein no 0.41
    13 GFF2529 L-galactonate dehydrogenase (EC 1.1.1.-) no 0.40
    14 GFF2506 Multiple antibiotic resistance protein MarA no 0.40
    15 GFF4632 Endonuclease VIII no 0.39
    16 GFF2550 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.56 0.38
    17 GFF1668 Positive regulator of CheA protein activity (CheW) 0.23 0.38
    18 GFF4178 FIG074102: hypothetical protein no 0.38
    19 GFF4110 Fermentation/respiration switch protein 0.62 0.38
    20 GFF1542 Flagellar biosynthesis protein FliC no 0.38

    Or look for negative cofitness