Top cofit genes for GFF2054 from Hydrogenophaga sp. GW460-11-11-14-LB1

Cu(I)-responsive transcriptional regulator
SEED: Cu(I)-responsive transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF2691		Glutathione S-transferase domain protein	no	0.50
2	GFF3792		TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3	no	0.50
3	GFF2640		Single-stranded DNA-binding protein	no	0.48
4	GFF1441		Flagellar hook-associated protein FliD	no	0.48
5	GFF4438		Conjugative transfer protein TrbE	no	0.48
6	GFF4026		Cytosine deaminase (EC 3.5.4.1)	no	0.46
7	GFF3915		Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	no	0.45
8	GFF2367		hypothetical protein	no	0.43
9	GFF5052		Dihydrofolate reductase (EC 1.5.1.3)	no	0.43
10	GFF731		putative exported protein	no	0.43
11	GFF1193		Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	no	0.43
12	GFF5524		TRAP transporter solute receptor, unknown substrate 3	no	0.43
13	GFF2972		TRAP-type C4-dicarboxylate transport system, large permease component	no	0.43
14	GFF4442		Conjugative transfer protein TrbG	no	0.43
15	GFF802		NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)	no	0.43
16	GFF728		DNA polymerase IV (EC 2.7.7.7)	no	0.43
17	GFF5630		Transcriptional regulator, AraC family	no	0.43
18	GFF161		Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	no	0.43
19	GFF2049		Permeases of the major facilitator superfamily	no	0.42
20	GFF2304		hypothetical protein	no	0.42

Or look for negative cofitness