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  • Top cofit genes for PS417_10445 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family
    KEGG: LysR family transcriptional regulator, transcriptional activator of nhaA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00455 hypothetical protein 0.31 0.22
    2 PS417_17755 hypothetical protein no 0.22
    3 PS417_22870 lipoprotein no 0.21
    4 PS417_17800 microcin B17-processing protein McbD no 0.21
    5 PS417_06330 S-(hydroxymethyl)glutathione dehydrogenase 0.35 0.21
    6 PS417_01550 cell envelope biogenesis protein AsmA 0.23 0.21
    7 PS417_04310 hypothetical protein 0.60 0.20
    8 PS417_26565 LysR family transcriptional regulator 0.51 0.20
    9 PS417_07510 aspartyl beta-hydroxylase no 0.20
    10 PS417_05710 hypothetical protein 0.74 0.20
    11 PS417_16295 hypothetical protein no 0.20
    12 PS417_17630 RNA polymerase sigma factor no 0.20
    13 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.41 0.20
    14 PS417_28450 XRE family transcriptional regulator 0.22 0.19
    15 PS417_00475 membrane protein no 0.18
    16 PS417_01180 ribosomal protein S6 modification protein 0.33 0.18
    17 PS417_13545 arginine aminotransferase no 0.18
    18 PS417_21100 alpha-L-glutamate ligase 0.23 0.18
    19 PS417_11280 HxcX atypical pseudopilin no 0.18
    20 PS417_14420 acyl-CoA dehydrogenase no 0.18

    Or look for negative cofitness