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  • Top cofit genes for PS417_10420 from Pseudomonas simiae WCS417

    shikimate dehydrogenase
    SEED: Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13545 arginine aminotransferase no 0.26
    2 PS417_02705 urease accessory protein UreF no 0.25
    3 PS417_26240 N-methylproline demethylase no 0.25
    4 PS417_26560 amino acid dehydrogenase 0.54 0.24
    5 PS417_00295 hypothetical protein 0.44 0.24
    6 PS417_02020 LysR family transcriptional regulator no 0.22
    7 PS417_00350 methionine ABC transporter substrate-binding protein 0.33 0.22
    8 PS417_03430 methyltransferase type 11 no 0.22
    9 PS417_09745 peptide ABC transporter substrate-binding protein no 0.21
    10 PS417_24125 hypothetical protein no 0.21
    11 PS417_04770 LysR family transcriptional regulator no 0.21
    12 PS417_09080 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase no 0.21
    13 PS417_09915 hypothetical protein no 0.21
    14 PS417_06015 hypothetical protein no 0.21
    15 PS417_08685 flagellar hook-length control protein FliK no 0.21
    16 PS417_18620 hypothetical protein no 0.21
    17 PS417_06575 DoxX no 0.20
    18 PS417_06945 membrane protein no 0.20
    19 PS417_20515 FMN-dependent NADH-azoreductase 0.23 0.20
    20 PS417_12380 peptidase S54 0.19 0.20

    Or look for negative cofitness