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  • Top cofit genes for GFF2039 from Sphingobium sp. HT1-2

    RNA polymerase ECF-type sigma factor
    SEED: RNA polymerase, sigma-24 subunit, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1547 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.76
    2 GFF4729 Oxidoreductase, GMC family no 0.73
    3 GFF1788 hypothetical protein no 0.73
    4 GFF4906 hypothetical protein no 0.71
    5 GFF2064 RidA/YER057c/UK114 superfamily protein no 0.70
    6 GFF3909 hypothetical protein no 0.70
    7 GFF1314 hypothetical protein no 0.69
    8 GFF2659 hypothetical protein no 0.68
    9 GFF5015 Integrase-like protein no 0.67
    10 GFF5130 conserved hypothetical protein-transmembrane prediction no 0.66
    11 GFF5322 hypothetical protein no 0.66
    12 GFF2158 Transcriptional regulator, MarR family no 0.66
    13 GFF1523 NADH dehydrogenase (EC 1.6.99.3) no 0.65
    14 GFF2499 Alkaline phosphatase (EC 3.1.3.1) no 0.65
    15 GFF4867 hypothetical protein no 0.65
    16 GFF1993 NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2) no 0.64
    17 GFF1221 Bll6394 protein no 0.63
    18 GFF3661 D-alanine--D-alanine ligase (EC 6.3.2.4) no 0.63
    19 GFF4226 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) no 0.63
    20 GFF1317 hypothetical protein no 0.63

    Or look for negative cofitness