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  • Top cofit genes for GFF2030 from Variovorax sp. SCN45

    ABC-type branched-chain amino acid transport systems, periplasmic component
    SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily no 0.61
    2 GFF2022 Acyl-CoA dehydrogenase no 0.60
    3 GFF6480 hypothetical protein no 0.60
    4 GFF664 no description no 0.60
    5 GFF1518 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.58
    6 GFF6603 Glycosidases no 0.57
    7 GFF2249 no description no 0.57
    8 GFF2124 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center no 0.57
    9 GFF740 Uncharacterized protein YdcJ no 0.56
    10 GFF5669 hypothetical protein no 0.56
    11 GFF3584 hypothetical protein no 0.56
    12 GFF2381 Ribonuclease PH (EC 2.7.7.56) no 0.56
    13 GFF2450 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) no 0.55
    14 GFF3959 Uncharacterized integral membrane endopeptidase Bmul_2226 no 0.54
    15 GFF3360 no description no 0.53
    16 GFF4457 Monofunctional biosynthetic peptidoglycan transglycosylase no 0.53
    17 GFF745 BUG/TctC family periplasmic protein no 0.52
    18 GFF6235 hypothetical protein no 0.52
    19 GFF5629 Uncharacterized MFS-type transporter no 0.52
    20 GFF3504 BUG/TctC family periplasmic protein no 0.52

    Or look for negative cofitness