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  • Top cofit genes for GFF2024 from Variovorax sp. SCN45

    L-lysine permease
    KEGG: homoserine/homoserine lactone efflux protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1598 no description no 0.57
    2 GFF1665 Nicotinamidase/isochorismatase family protein no 0.56
    3 GFF5600 no description no 0.53
    4 GFF1909 FIG00537389: hypothetical protein no 0.52
    5 GFF7109 BUG/TctC family periplasmic protein no 0.52
    6 GFF4262 hypothetical protein 0.17 0.51
    7 GFF859 Lactoylglutathione lyase (EC 4.4.1.5) no 0.51
    8 GFF6175 hypothetical protein no 0.51
    9 GFF4511 Transcriptional regulator, LysR family no 0.51
    10 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    11 GFF757 hypothetical protein no 0.50
    12 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.50
    13 GFF3774 hypothetical protein no 0.48
    14 GFF5906 Nitrilase (EC 3.5.5.7) no 0.48
    15 GFF307 FIG143263: Glycosyl transferase no 0.48
    16 GFF2437 hypothetical protein no 0.47
    17 GFF7222 Coenzyme F390 synthetase no 0.47
    18 GFF6735 hypothetical protein no 0.47
    19 GFF6932 no description no 0.47
    20 GFF6485 hypothetical protein no 0.47

    Or look for negative cofitness