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  • Top cofit genes for GFF2021 from Variovorax sp. SCN45

    FIG00538369: hypothetical protein
    SEED: FIG00538369: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3125 no description no 0.59
    2 GFF5645 ABC transporter, permease protein (cluster 12, methionine/phosphonates) / ABC transporter, permease protein (cluster 12, methionine/phosphonates) no 0.58
    3 GFF4184 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.58
    4 GFF6805 FIG00821908: hypothetical protein no 0.57
    5 GFF5270 BUG/TctC family periplasmic protein no 0.57
    6 GFF3308 Inner membrane protein CreD no 0.55
    7 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.55
    8 GFF7322 hypothetical protein no 0.54
    9 GFF1947 no description no 0.54
    10 GFF6026 no description no 0.53
    11 GFF4689 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein CzcB no 0.53
    12 GFF5074 Two-component transcriptional response regulator Dtpsy_0213, OmpR family no 0.53
    13 GFF5402 Transcriptional regulator, IclR family no 0.53
    14 GFF6737 Uncharacterized aldehyde oxidase, 2Fe-2S subunit no 0.53
    15 GFF2259 Alcohol dehydrogenase (EC 1.1.1.1) 0.35 0.53
    16 GFF1362 no description no 0.52
    17 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.52
    18 GFF5874 hypothetical protein no 0.52
    19 GFF5922 T6SS forkhead associated domain protein ImpI/VasC no 0.51
    20 GFF3299 Pirin no 0.51

    Or look for negative cofitness